fluid io for cartesian coordinates, double percision More...

#include <FluidIO.hpp>

Collaboration diagram for fileio::FluidCartRegularD< N_dim, FT >:

[legend]

Public Member Functions
	FluidCartRegularD ()
	Construct a new Fluid Cart Regular D object. More...

	~FluidCartRegularD ()
	Destroy the Fluid Cart Regular D object. More...

auto &	SetMeshc (const int dim, const int N, const double meshc[])
	Set the Mesh [center] object. More...

auto &	SetMeshf (int dim, int N, const double meshf[])
	Set the Mesh [face] object. More...

auto &	SetGhostMesh (std::vector< int > gh_down, std::vector< int > gh_up={})
	Set the Ghost Mesh object if gh_up={}, it means that gh_down and gh_up have the same size of ghost mesh if the size of gh_down n is below N_dim, the size of ghost mesh of gh_down[n] and gh_down[n+1]...gh_down[N_dim-1] should equal to gh_down[n-1];. More...

auto &	SetGhostMesh (std::vector< std::vector< int >> gh)

auto &	SetGhostMesh (int gh_down, int gh_up=-1)
	Set the Ghost Mesh object if only input gh_down, it means that gh_up=gh_down. More...

auto &	SetDomain (std::vector< double > domain_down, std::vector< double > domain_up)
	Set the compuational Domain object if the size of domain_down/up n is below N_dim, the value of domain_down/up[n] ,[n+1]should equal to domain_down/up[n-1];. More...

auto &	SetDomain (std::vector< std::vector< double >> domain)

auto &	SetFileAttr (std::string name, std::string val)
	Set the File Attributes object not to create attribute, just set the standard attribute to the buffer in current object. More...

auto &	SetFileAttr (std::string name, double val)
	Set the File Attributes object not to create attribute, just set the standard attribute to the buffer in current object. More...

void	Print ()
	Print the abstract of the current file attributes. More...

auto	CreateFile (const int istep, const std::string ftype)
	Create a hdf5 File. More...

void	CloseFile ()
	Close opened hdf5 file. More...

auto &	AddAttributeTo (const FluidGroup &group, const std::string attrname, const std::string str)
	add extra attribute to different groups [string] More...

auto &	AddAttributeTo (const FluidGroup &group, const std::string attrname, const int intdata[], const int n)
	add extra attribute to different groups [int array] More...

auto &	AddAttributeTo (const FluidGroup &group, const std::string attrname, const double data[], const int n)
	add extra attribute to different groups [double array] More...

auto &	AddAttributeTo (const FluidGroup &group, const std::string attrname, const int intdata)
	add extra attribute to different groups [int] More...

auto &	AddAttributeTo (const FluidGroup &group, const std::string attrname, const double data)
	add extra attribute to different groups [double] More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const int intdata[], const int n0)
	add dataset to different groups [int array] one dimension More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const int intdata[], const int n0, const int n1)
	add dataset to different groups [int array] two dimension More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const int intdata[], const int n0, const int n1, const int n2)
	add dataset to different groups [int array] three dimension More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const double data[], const int n0)
	add dataset to different groups [double array] one dimension More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const double data[], const int n0, const int n1)
	add dataset to different groups [double array] two dimension More...

auto &	AddDataSetTo (const FluidGroup &group, const std::string dataname, const double data[], const int n0, const int n1, const int n2)
	add dataset to different groups [double array] three dimension More...

auto &	AddDataSetCplxTo (const FluidGroup &group, const std::string dataname, const std::complex< double > data[], const int n0, const int n1)

auto &	AddField (const std::string fieldname, const double data[], const std::vector< int > shape, const std::vector< int > gridflag, const std::vector< int > shapetotal)
	add Field to Field group for mpi version, but it also supports serial version More...

auto &	AddFieldWithoutGhost (const std::string &fieldname, const double data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	AddFieldDefault (const std::string &fieldname, const double data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	AddCplxField (const std::string fieldname, const std::complex< double > data[], const std::vector< int > shape, const std::vector< int > gridflag, const std::vector< int > shapetotal)

auto &	AddCplxFieldWithoutGhost (const std::string &fieldname, const std::complex< double > data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	AddCplxFieldDefault (const std::string &fieldname, const std::complex< double > data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	AddField (const std::string fieldname, double data[], std::vector< int > shape, std::vector< int > gridflag)
	add Field to Field group only support serial version More...

auto &	AddCplxField (const std::string fieldname, std::complex< double > data[], std::vector< int > shape, std::vector< int > gridflag)

void	CalOffset (const std::vector< int > &shape, const std::vector< int > &gridflag, hsize_t offset[])
	calculate offset for writing data by mpi More...

void	MemSlice (const auto in, auto out, const int shape[], hsize_t offset[], hsize_t count[])

auto	OpenFile (const int istep, const std::string ftype)
	Open a existed file. More...

auto &	ReadAttributeFrom (const FluidGroup &group, const std::string attrname, std::string &str)
	Read attribute from different groups[string]. More...

auto &	ReadAttributeFrom (const FluidGroup &group, const std::string attrname, int intdata[])
	Read attribute from different groups [int array]. More...

auto &	ReadAttributeFrom (const FluidGroup &group, const std::string attrname, double data[])
	Read attribute from different groups [double array]. More...

auto &	ReadDataSetFrom (const FluidGroup &group, const std::string dataname, int intdata[])
	Read dataset from different groups [int array]. More...

auto &	ReadDataSetFrom (const FluidGroup &group, const std::string dataname, double data[])
	Read dataset from different groups [double array]. More...

auto &	ReadField (const std::string fieldname, double data[], std::vector< int > shape, std::vector< int > gridflag, const std::vector< int > shapetotal)
	Read field from Field group for mpi verison, but it also supports serial version. More...

auto &	ReadFieldWithoutGhost (const std::string &fieldname, double data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	ReadFieldDefault (const std::string &fieldname, double data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	ReadCplxField (const std::string fieldname, std::complex< double > data[], std::vector< int > shape, std::vector< int > gridflag, const std::vector< int > shapetotal)

auto &	ReadCplxFieldWithoutGhost (const std::string &fieldname, std::complex< double > data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	ReadCplxFieldDefault (const std::string &fieldname, std::complex< double > data[], const std::vector< int > &shape, const std::vector< int > &gridflag, const std::vector< int > &shapetotal)

auto &	ReadField (const std::string fieldname, double data[], std::vector< int > shape, std::vector< int > gridflag)
	Read field from Field group only support serial verison. More...

auto &	ReadCplxField (const std::string fieldname, std::complex< double > data[], std::vector< int > shape, std::vector< int > gridflag)

Static Public Member Functions
static void	AllocateBuffer (const int &maxlength)

static void	DeallocateBuffer ()

Public Attributes
hid_t	fileid
	handles of HDF5 More...

hid_t	filepropid

hid_t	dataspaceid

hid_t	physparaid

hid_t	otherinfoid

hid_t	fieldid

Private Attributes
const int	_dim = N_dim

std::string	_casename = "default"

std::string	_space = "physical"

std::string	_filestyle = "onestep"

std::string	_storagestyle = "c-style"

std::string	_dataspacestyle = "cartregular"

std::string	_filepath = "./"

std::string	_filenameprefix = "fluidfield"

int	_meshnumc [N_dim] = {0}

int	_meshnumf [N_dim] = {0}

int	_gh_down [N_dim] = {0}

int	_gh_up [N_dim] = {0}

double *	_ptr_meshc [N_dim]

double *	_ptr_meshf [N_dim]

int	_numbernamelength = 7

double	_domain_down [N_dim] = {0}

double	_domain_up [N_dim] = {0}

double	_visc0 = 0.

double	_rho0 = 0.

int	_mpi_coord [N_dim]

int	_mpi_proc [N_dim]

Static Private Attributes
static double *	_rtemp = nullptr

static std::complex< double > *	_ctemp = nullptr

static int	_maxlength = 0

Detailed Description

template<int N_dim, FileTag FT = FileTag::WithoutGhost>
class fileio::FluidCartRegularD< N_dim, FT >

fluid io for cartesian coordinates, double percision

Constructor & Destructor Documentation

◆ FluidCartRegularD()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

fileio::FluidCartRegularD< N_dim, FT >::FluidCartRegularD ( )

inline

Construct a new Fluid Cart Regular D object.

References fileio::FluidCartRegularD< N_dim, FT >::_gh_down, fileio::FluidCartRegularD< N_dim, FT >::_gh_up, fileio::FluidCartRegularD< N_dim, FT >::_meshnumc, fileio::FluidCartRegularD< N_dim, FT >::_meshnumf, fileio::FluidCartRegularD< N_dim, FT >::_mpi_coord, fileio::FluidCartRegularD< N_dim, FT >::_mpi_proc, fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshc, and fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshf.

◆ ~FluidCartRegularD()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

fileio::FluidCartRegularD< N_dim, FT >::~FluidCartRegularD ( )

inline

Destroy the Fluid Cart Regular D object.

References fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshc, and fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshf.

Member Function Documentation

◆ AddAttributeTo() [1/5]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddAttributeTo	(	const FluidGroup &	group,
		const std::string	attrname,
		const double	data
	)

add extra attribute to different groups [double]

Parameters

group	which group, an enum constant
attrname	attribute name
data	attribute, double

Returns: auto& *this

References fileio::AddAttribute(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddAttributeTo() [2/5]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddAttributeTo	(	const FluidGroup &	group,
		const std::string	attrname,
		const double	data[],
		const int	n
	)

add extra attribute to different groups [double array]

Parameters

group	which group, an enum constant
attrname	attribute name
data	attribute, double array
n	size of double array

Returns: auto& *this

References fileio::AddAttribute(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddAttributeTo() [3/5]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddAttributeTo	(	const FluidGroup &	group,
		const std::string	attrname,
		const int	intdata
	)

add extra attribute to different groups [int]

Parameters

group	which group ,a enum constant
attrname	attribute name
intdata	attribute,int

Returns: auto& *this

References fileio::AddAttribute(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddAttributeTo() [4/5]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddAttributeTo	(	const FluidGroup &	group,
		const std::string	attrname,
		const int	intdata[],
		const int	n
	)

add extra attribute to different groups [int array]

Parameters

group	which group ,a enum constant
attrname	attribute name
intdata	attribute,int array
n	size of int array

Returns: auto& *this

References fileio::AddAttribute(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddAttributeTo() [5/5]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddAttributeTo	(	const FluidGroup &	group,
		const std::string	attrname,
		const std::string	str
	)

add extra attribute to different groups [string]

Parameters

group	which group ,a enum constant
attrname	attribute name
str	attribute val

Returns: auto& *this

References fileio::AddAttribute(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddCplxField() [1/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddCplxField	(	const std::string	fieldname,
		const std::complex< double >	data[],
		const std::vector< int >	shape,
		const std::vector< int >	gridflag,
		const std::vector< int >	shapetotal
	)

References fileio::WithoutGhost.

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◆ AddCplxField() [2/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::AddCplxField	(	const std::string	fieldname,
		std::complex< double >	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag
	)

inline

References fileio::FluidCartRegularD< N_dim, FT >::AddCplxField().

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◆ AddCplxFieldDefault()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddCplxFieldDefault	(	const std::string &	fieldname,
		const std::complex< double >	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::AddAttribute(), and fileio::DestroyCompound().

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◆ AddCplxFieldWithoutGhost()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddCplxFieldWithoutGhost	(	const std::string &	fieldname,
		const std::complex< double >	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::AddAttribute(), and fileio::DestroyCompound().

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◆ AddDataSetCplxTo()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetCplxTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const std::complex< double >	data[],
		const int	n0,
		const int	n1
	)

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

◆ AddDataSetTo() [1/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const double	data[],
		const int	n0
	)

add dataset to different groups [double array] one dimension

Parameters

group	which group, an enum constant
dataname	dataset name
data	double array
n0	size of double array, 0-dimension

Returns: auto&

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddDataSetTo() [2/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const double	data[],
		const int	n0,
		const int	n1
	)

add dataset to different groups [double array] two dimension

Parameters

group	which group, an enum constant
dataname	dataset name
data	double array
n0	size of double array, 0-dimension
n1	size of double array, 1-dimension

Returns: auto&

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddDataSetTo() [3/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const double	data[],
		const int	n0,
		const int	n1,
		const int	n2
	)

add dataset to different groups [double array] three dimension

Parameters

group	which group, an enum constant
dataname	dataset name
data	double array
n0	size of int array, 0-dimension
n1	size of int array, 1-dimension
n2	size of int array, 2-dimension

Returns: auto& *this

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddDataSetTo() [4/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const int	intdata[],
		const int	n0
	)

add dataset to different groups [int array] one dimension

Parameters

group	which group, an enum constant
dataname	dataset name
intdata	int array
n0	size of int array, 0-dimension

Returns: auto& *this

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddDataSetTo() [5/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const int	intdata[],
		const int	n0,
		const int	n1
	)

add dataset to different groups [int array] two dimension

Parameters

group	which group, an enum constant
dataname	dataset name
intdata	int array
n0	size of int array, 0-dimension
n1	size of int array, 1-dimension
n2	size of int array, 2-dimension

Returns: auto& *this

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddDataSetTo() [6/6]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddDataSetTo	(	const FluidGroup &	group,
		const std::string	dataname,
		const int	intdata[],
		const int	n0,
		const int	n1,
		const int	n2
	)

add dataset to different groups [int array] three dimension

Parameters

group	which group, an enum constant
dataname	dataset name
intdata	int array
n0	size of int array, 0-dimension
n1	size of int array, 1-dimension

Returns: auto& *this

References fileio::AddDataSet(), fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, and fileio::kPhysPara.

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◆ AddField() [1/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddField	(	const std::string	fieldname,
		const double	data[],
		const std::vector< int >	shape,
		const std::vector< int >	gridflag,
		const std::vector< int >	shapetotal
	)

add Field to Field group for mpi version, but it also supports serial version

Parameters

fieldname	field name
data	double data
shape	shape of field at current proc
gridflag	grid flag (1,0,1),(F,c,F)
shapetotal	total shape of field

Returns: auto& *this

References fileio::WithoutGhost.

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◆ AddField() [2/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::AddField	(	const std::string	fieldname,
		double	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag
	)

inline

add Field to Field group only support serial version

Parameters

fieldname	field name
data	double data
shape	shape of field at current proc
gridflag	grid flag (1,0,1),(F,c,F)

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::AddField().

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◆ AddFieldDefault()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddFieldDefault	(	const std::string &	fieldname,
		const double	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::AddAttribute().

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◆ AddFieldWithoutGhost()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::AddFieldWithoutGhost	(	const std::string &	fieldname,
		const double	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::AddAttribute().

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◆ AllocateBuffer()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

static void fileio::FluidCartRegularD< N_dim, FT >::AllocateBuffer ( const int & maxlength )

inlinestatic

References fileio::FluidCartRegularD< N_dim, FT >::_ctemp, fileio::FluidCartRegularD< N_dim, FT >::_maxlength, fileio::FluidCartRegularD< N_dim, FT >::_rtemp, and fileio::WithoutGhost.

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◆ CalOffset()

template<int N_dim, FileTag FT>

void fileio::FluidCartRegularD< N_dim, FT >::CalOffset	(	const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		hsize_t	offset[]
	)

calculate offset for writing data by mpi

Template Parameters

N_dim
FT	FileTag

Parameters

shape	array size of the current block
gridflag	center or face
offset

◆ CloseFile()

template<int N_dim, FileTag FT>

void fileio::FluidCartRegularD< N_dim, FT >::CloseFile

Close opened hdf5 file.

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◆ CreateFile()

template<int N_dim, FileTag FT>

auto fileio::FluidCartRegularD< N_dim, FT >::CreateFile	(	const int	istep,
		const std::string	ftype
	)

Create a hdf5 File.

Parameters

istep	computation step
ftype	select a file style, onestep/mid

Returns: auto id of opened file

References fileio::AddAttribute(), fileio::AddDataSet(), fileio::DataSpace(), fileio::Fields(), fileio::FileProps(), fileio::intTostr(), fileio::Others(), fileio::PhysParams(), and fileio::WithoutGhost.

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◆ DeallocateBuffer()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

static void fileio::FluidCartRegularD< N_dim, FT >::DeallocateBuffer ( )

inlinestatic

References fileio::FluidCartRegularD< N_dim, FT >::_ctemp, fileio::FluidCartRegularD< N_dim, FT >::_maxlength, fileio::FluidCartRegularD< N_dim, FT >::_rtemp, and fileio::WithoutGhost.

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◆ MemSlice()

template<int N_dim, FileTag FT>

void fileio::FluidCartRegularD< N_dim, FT >::MemSlice	(	const auto *	in,
		auto *	out,
		const int	shape[],
		hsize_t	offset[],
		hsize_t	count[]
	)

References fileio::WithoutGhost.

◆ OpenFile()

template<int N_dim, FileTag FT>

auto fileio::FluidCartRegularD< N_dim, FT >::OpenFile	(	const int	istep,
		const std::string	ftype
	)

Open a existed file.

Parameters

istep	computational step
ftype	file style : onestep/mid

Returns: auto id of opened file

References fileio::DataSpace(), fileio::Fields(), fileio::FileProps(), fileio::intTostr(), fileio::kFileProp, fileio::kGeoMesh, fileio::kPhysPara, fileio::Others(), fileio::PhysParams(), and fileio::WithoutGhost.

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◆ Print()

template<int N_dim, FileTag FT>

void fileio::FluidCartRegularD< N_dim, FT >::Print

Print the abstract of the current file attributes.

References fileio::intTostr().

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◆ ReadAttributeFrom() [1/3]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadAttributeFrom	(	const FluidGroup &	group,
		const std::string	attrname,
		double	data[]
	)

Read attribute from different groups [double array].

Parameters

[in]	group	which group, an enum constant
[in]	attrname	attribute name
[out]	data	attribute value,double array

Returns: auto& *this

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, fileio::kPhysPara, and fileio::ReadAttribute().

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◆ ReadAttributeFrom() [2/3]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadAttributeFrom	(	const FluidGroup &	group,
		const std::string	attrname,
		int	intdata[]
	)

Read attribute from different groups [int array].

Parameters

[in]	group	which group, an enum constant
[in]	attrname	attribute name
[out]	intdata	attribute value,int array

Returns: auto& *this

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, fileio::kPhysPara, and fileio::ReadAttribute().

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◆ ReadAttributeFrom() [3/3]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadAttributeFrom	(	const FluidGroup &	group,
		const std::string	attrname,
		std::string &	str
	)

Read attribute from different groups[string].

Parameters

[in]	group	which group, an enum constant
[in]	attrname	attribute name
[out]	str	attribute value

Returns: auto& *this

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, fileio::kPhysPara, and fileio::ReadStringAttribute().

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◆ ReadCplxField() [1/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::ReadCplxField	(	const std::string	fieldname,
		std::complex< double >	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag
	)

inline

References fileio::FluidCartRegularD< N_dim, FT >::ReadCplxField().

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◆ ReadCplxField() [2/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadCplxField	(	const std::string	fieldname,
		std::complex< double >	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag,
		const std::vector< int >	shapetotal
	)

References fileio::WithoutGhost.

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◆ ReadCplxFieldDefault()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadCplxFieldDefault	(	const std::string &	fieldname,
		std::complex< double >	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::ReadAttribute().

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◆ ReadCplxFieldWithoutGhost()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadCplxFieldWithoutGhost	(	const std::string &	fieldname,
		std::complex< double >	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::ReadAttribute().

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◆ ReadDataSetFrom() [1/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadDataSetFrom	(	const FluidGroup &	group,
		const std::string	dataname,
		double	data[]
	)

Read dataset from different groups [double array].

Parameters

[in]	group	which group, an enum constant
[in]	dataname	attribute name
[out]	data	attribute value,int array

Returns: auto& *this

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, fileio::kPhysPara, and fileio::ReadDataSet().

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◆ ReadDataSetFrom() [2/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadDataSetFrom	(	const FluidGroup &	group,
		const std::string	dataname,
		int	intdata[]
	)

Read dataset from different groups [int array].

Parameters

[in]	group	which group, an enum constant
[in]	dataname	attribute name
[out]	intdata	attribute value,int array

Returns: auto& *this

References fileio::kField, fileio::kFileProp, fileio::kGeoMesh, fileio::kOtherInfo, fileio::kPhysPara, and fileio::ReadDataSet().

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◆ ReadField() [1/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::ReadField	(	const std::string	fieldname,
		double	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag
	)

inline

Read field from Field group only support serial verison.

Parameters

[in]	fieldname	field name
[out]	data	field data
[in]	shape	shape of field
[in]	gridflag	grid flag, (1,0,1) means (Face,center,Face)

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::ReadField().

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◆ ReadField() [2/2]

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadField	(	const std::string	fieldname,
		double	data[],
		std::vector< int >	shape,
		std::vector< int >	gridflag,
		const std::vector< int >	shapetotal
	)

Read field from Field group for mpi verison, but it also supports serial version.

Parameters

[in]	fieldname	field name
[out]	data	field data
[in]	shape	shape of field
[in]	gridflag	grid flag, (1,0,1) means (Face,center,Face)

Returns: auto& *this

References fileio::WithoutGhost.

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◆ ReadFieldDefault()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadFieldDefault	(	const std::string &	fieldname,
		double	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::ReadAttribute().

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◆ ReadFieldWithoutGhost()

template<int N_dim, FileTag FT>

auto & fileio::FluidCartRegularD< N_dim, FT >::ReadFieldWithoutGhost	(	const std::string &	fieldname,
		double	data[],
		const std::vector< int > &	shape,
		const std::vector< int > &	gridflag,
		const std::vector< int > &	shapetotal
	)

References fileio::ReadAttribute().

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◆ SetDomain() [1/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetDomain	(	std::vector< double >	domain_down,
		std::vector< double >	domain_up
	)

inline

Set the compuational Domain object if the size of domain_down/up n is below N_dim, the value of domain_down/up[n] ,[n+1]should equal to domain_down/up[n-1];.

Parameters

domain_down	the lower boundary of Domain
domain_up	the upper boundary of domain

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_domain_down, and fileio::FluidCartRegularD< N_dim, FT >::_domain_up.

◆ SetDomain() [2/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetDomain ( std::vector< std::vector< double >> domain )

inline

References fileio::FluidCartRegularD< N_dim, FT >::_domain_down, and fileio::FluidCartRegularD< N_dim, FT >::_domain_up.

◆ SetFileAttr() [1/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetFileAttr	(	std::string	name,
		double	val
	)

inline

Set the File Attributes object not to create attribute, just set the standard attribute to the buffer in current object.

Parameters

name	attribute name
val	attribute value

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_rho0, fileio::FluidCartRegularD< N_dim, FT >::_visc0, and fileio::strToLower().

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◆ SetFileAttr() [2/2]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetFileAttr	(	std::string	name,
		std::string	val
	)

inline

Set the File Attributes object not to create attribute, just set the standard attribute to the buffer in current object.

Parameters

name	attribute name
val	attribute value

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_casename, fileio::FluidCartRegularD< N_dim, FT >::_dataspacestyle, fileio::FluidCartRegularD< N_dim, FT >::_filenameprefix, fileio::FluidCartRegularD< N_dim, FT >::_filepath, fileio::FluidCartRegularD< N_dim, FT >::_filestyle, fileio::FluidCartRegularD< N_dim, FT >::_space, fileio::FluidCartRegularD< N_dim, FT >::_storagestyle, and fileio::strToLower().

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◆ SetGhostMesh() [1/3]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetGhostMesh	(	int	gh_down,
		int	gh_up = `-1`
	)

inline

Set the Ghost Mesh object if only input gh_down, it means that gh_up=gh_down.

Parameters

gh_down	ghost mesh size of lower boudnary
gh_up	ghost mesh size of upper boudnary

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_gh_down, and fileio::FluidCartRegularD< N_dim, FT >::_gh_up.

◆ SetGhostMesh() [2/3]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetGhostMesh	(	std::vector< int >	gh_down,
		std::vector< int >	gh_up = `{}`
	)

inline

Set the Ghost Mesh object if gh_up={}, it means that gh_down and gh_up have the same size of ghost mesh if the size of gh_down n is below N_dim, the size of ghost mesh of gh_down[n] and gh_down[n+1]...gh_down[N_dim-1] should equal to gh_down[n-1];.

Parameters

gh_down	ghost mesh size of lower boudnary
gh_up	ghost mesh size of upper boudnary

Returns: auto& *this

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◆ SetGhostMesh() [3/3]

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetGhostMesh ( std::vector< std::vector< int >> gh )

inline

References fileio::FluidCartRegularD< N_dim, FT >::_gh_down, and fileio::FluidCartRegularD< N_dim, FT >::_gh_up.

◆ SetMeshc()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetMeshc	(	const int	dim,
		const int	N,
		const double	meshc[]
	)

inline

Set the Mesh [center] object.

Parameters

dim	which dimension/direction
N	size of mesh
meshc	mesh [center]

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_meshnumc, and fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshc.

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◆ SetMeshf()

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

auto& fileio::FluidCartRegularD< N_dim, FT >::SetMeshf	(	int	dim,
		int	N,
		const double	meshf[]
	)

inline

Set the Mesh [face] object.

Parameters

dim	which dimension/direction
N	size of mesh
meshf	mesh [face]

Returns: auto& *this

References fileio::FluidCartRegularD< N_dim, FT >::_meshnumf, and fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshf.

Member Data Documentation

◆ _casename

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_casename = "default"

private

◆ _ctemp

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::complex<double>* fileio::FluidCartRegularD< N_dim, FT >::_ctemp = nullptr

inlinestaticprivate

◆ _dataspacestyle

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_dataspacestyle = "cartregular"

private

◆ _dim

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

const int fileio::FluidCartRegularD< N_dim, FT >::_dim = N_dim

private

◆ _domain_down

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double fileio::FluidCartRegularD< N_dim, FT >::_domain_down[N_dim] = {0}

private

◆ _domain_up

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double fileio::FluidCartRegularD< N_dim, FT >::_domain_up[N_dim] = {0}

private

◆ _filenameprefix

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_filenameprefix = "fluidfield"

private

◆ _filepath

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_filepath = "./"

private

◆ _filestyle

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_filestyle = "onestep"

private

◆ _gh_down

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_gh_down[N_dim] = {0}

private

◆ _gh_up

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_gh_up[N_dim] = {0}

private

◆ _maxlength

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_maxlength = 0

inlinestaticprivate

◆ _meshnumc

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_meshnumc[N_dim] = {0}

private

◆ _meshnumf

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_meshnumf[N_dim] = {0}

private

◆ _mpi_coord

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_mpi_coord[N_dim]

private

◆ _mpi_proc

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_mpi_proc[N_dim]

private

◆ _numbernamelength

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

int fileio::FluidCartRegularD< N_dim, FT >::_numbernamelength = 7

private

◆ _ptr_meshc

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double* fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshc[N_dim]

private

◆ _ptr_meshf

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double* fileio::FluidCartRegularD< N_dim, FT >::_ptr_meshf[N_dim]

private

◆ _rho0

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double fileio::FluidCartRegularD< N_dim, FT >::_rho0 = 0.

private

◆ _rtemp

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double* fileio::FluidCartRegularD< N_dim, FT >::_rtemp = nullptr

inlinestaticprivate

◆ _space

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_space = "physical"

private

◆ _storagestyle

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

std::string fileio::FluidCartRegularD< N_dim, FT >::_storagestyle = "c-style"

private

◆ _visc0

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

double fileio::FluidCartRegularD< N_dim, FT >::_visc0 = 0.

private

◆ dataspaceid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::dataspaceid

◆ fieldid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::fieldid

◆ fileid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::fileid

handles of HDF5

◆ filepropid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::filepropid

◆ otherinfoid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::otherinfoid

◆ physparaid

template<int N_dim, FileTag FT = FileTag::WithoutGhost>

hid_t fileio::FluidCartRegularD< N_dim, FT >::physparaid

The documentation for this class was generated from the following file:

/mnt/e/linuxOS/PhyStar/IO/FileIO/FluidIO.hpp

Public Member Functions

Static Public Member Functions

Public Attributes

Private Attributes

Static Private Attributes

Detailed Description

template<int N_dim, FileTag FT = FileTag::WithoutGhost> class fileio::FluidCartRegularD< N_dim, FT >

Constructor & Destructor Documentation

◆ FluidCartRegularD()

◆ ~FluidCartRegularD()

Member Function Documentation

◆ AddAttributeTo() [1/5]

◆ AddAttributeTo() [2/5]

◆ AddAttributeTo() [3/5]

◆ AddAttributeTo() [4/5]

◆ AddAttributeTo() [5/5]

◆ AddCplxField() [1/2]

◆ AddCplxField() [2/2]

◆ AddCplxFieldDefault()

◆ AddCplxFieldWithoutGhost()

◆ AddDataSetCplxTo()

◆ AddDataSetTo() [1/6]

◆ AddDataSetTo() [2/6]

◆ AddDataSetTo() [3/6]

◆ AddDataSetTo() [4/6]

◆ AddDataSetTo() [5/6]

◆ AddDataSetTo() [6/6]

◆ AddField() [1/2]

◆ AddField() [2/2]

◆ AddFieldDefault()

◆ AddFieldWithoutGhost()

◆ AllocateBuffer()

◆ CalOffset()

◆ CloseFile()

◆ CreateFile()

◆ DeallocateBuffer()

◆ MemSlice()

◆ OpenFile()

◆ Print()

◆ ReadAttributeFrom() [1/3]

◆ ReadAttributeFrom() [2/3]

◆ ReadAttributeFrom() [3/3]

◆ ReadCplxField() [1/2]

◆ ReadCplxField() [2/2]

◆ ReadCplxFieldDefault()

◆ ReadCplxFieldWithoutGhost()

◆ ReadDataSetFrom() [1/2]

◆ ReadDataSetFrom() [2/2]

◆ ReadField() [1/2]

◆ ReadField() [2/2]

◆ ReadFieldDefault()

◆ ReadFieldWithoutGhost()

◆ SetDomain() [1/2]

◆ SetDomain() [2/2]

◆ SetFileAttr() [1/2]

◆ SetFileAttr() [2/2]

◆ SetGhostMesh() [1/3]

◆ SetGhostMesh() [2/3]

◆ SetGhostMesh() [3/3]

◆ SetMeshc()

◆ SetMeshf()

Member Data Documentation

◆ _casename

◆ _ctemp

◆ _dataspacestyle

◆ _dim

◆ _domain_down

◆ _domain_up

◆ _filenameprefix

◆ _filepath

◆ _filestyle

◆ _gh_down

◆ _gh_up

◆ _maxlength

◆ _meshnumc

◆ _meshnumf

◆ _mpi_coord

◆ _mpi_proc

◆ _numbernamelength

◆ _ptr_meshc

template<int N_dim, FileTag FT = FileTag::WithoutGhost>
class fileio::FluidCartRegularD< N_dim, FT >